Pathway enrichment analysis and visualization of omics data using g:Profiler, GSEA, Cytoscape and EnrichmentMap | Nature Protocols
Web Site User's Guide for Pathway Tools-Based Web Sites
Ingenuity Pathway Analysis | QIAGEN Digital Insights
ShinyGO 0.77
Functional Analysis for RNA-seq | Training-modules
What Can Pathway Analysis Software Do For You? | Biocompare: The Buyer's Guide for Life Scientists
Frontiers | pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks
ToPASeq – an R package for topology-based pathway analysis of microarray and RNA-Seq data | RNA-Seq Blog
STAGEs: A web-based tool that integrates data visualization and pathway enrichment analysis for gene expression studies | Scientific Reports
Analysis Tools - Reactome Pathway Database
Integrative pathway enrichment analysis of multivariate omics data | Nature Communications
A review of computational tools for design and reconstruction of metabolic pathways - ScienceDirect
The secrets to pathway analysis - Bioinformatics Software | QIAGEN Digital Insights
Pathway analysis - Wikipedia
3 Approaches to Pathway Analysis - YouTube
ComPAT: A Comprehensive Pathway Analysis Tools | SpringerLink
Integrative pathway enrichment analysis of multivariate omics data | Nature Communications
Examples of pathway analysis tools in each generation. | Download Table
Exploring Best Pathway Analysis Tools for Biological Insights | by Sunailahmad | Medium
Pathway Commons: A Resource for Biological Pathway Analysis
Overview of The Pathway Tools Software
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets | Nature Communications
